m6AConquer Diagram

Welcome to m6AConquer !

N6-methyladenosine (m6A) is the most prevalent RNA modification in mammalian cells and the most extensively studied epitranscriptomic mark. The m6AConquer project (Consistent Quantification of External m6A RNA Modification Data) summarizes quantitative m6A data from 10 detection techniques using 2,788,705 (human) and 2,761,121 (mouse) consistent base-resolution features.

Available m6A detection techniques fall into 4 categories: antibody-assisted, chemical-assisted, enzyme-assisted, and direct-RNA sequencing. m6AConquer leverages this categorization to integrate and identify 139,700 orthogonally validated m6A sites reproducible across independent techniques in human and mouse. Additionally, m6AConquer consistently quantifies m6A profiling data and unifies site calling procedures, providing a standardised data-sharing framework. 4 types of multi-omics data, including m6A methylomes, expression levels, alternative splicing events, and variant calling results, are embedded into this framework. Using m6A methylome and genetic variant data, m6AConquer provides 6,034 m6A QTL locations. The current version of m6AConquer archived 1,928 FASTQ and FAST5 data, 1,394 sequencing samples, 72 cell lines or tissues, and 13 integrated orthogonal technique pairs.

Query

Single-Gene

Query m6A sites by gene names

Multiple-Gene

Query m6A modification levels by multiple genes

Integration

IDR Analysis

Visualization of reproducibility-based integration and browse orthogonally validated m6A sites

m6A QTL

m6A QTL & Disease Annotation

Browse m6A quantitative trait locus and disease annotation

Download

Single-Omics & Multi-Omics Frameworks

Download quantitative data sharing frameworks

Model Quality Report

Download sample specific data quality control report

Orthogonally Validated m6A Sites

Download m6A sites validated by orthogonal techniques

Differentially Methylated m6A Sites

Download orthogonally validated differential m6A sites

m6A QTL

Download m6A quantitative trait locus

IGV Browser

JBrowse

Browse m6A sites validated by orthogonal detection techniques

Help

Website Usage

User guides on how to use m6AConquer website

Data Framework Usage

User guides on how to use single-omics, multi-omics, and orthogonal validated m6A site data frameworks

About m6AConquer

Data resources used in m6AConquer project and database construction pipelines


m6AConquer Release Note:
Version 1.3 (2025.7)
  • Add downloadable m6A machine learning labels
  • Add downloadable OmicsFeature for human and mouse
Version 1.2 (2025.6.1)
  • Add alternative splicing and SNP data matrices
  • Add m6A QTL module
Version 1.1
  • m6AConquer is online.