N6-methyladenosine (m6A) is the most prevalent RNA modification in mammalian cells and the most extensively studied epitranscriptomic mark. The m6AConquer project (Consistent Quantification of External m6A RNA Modification Data) summarizes quantitative m6A data from 10 detection techniques using 2,788,705 consistent base-resolution features.
Available m6A detection techniques fall into 4 categories: antibody-assisted, chemical-assisted, enzyme-assisted, and direct-RNA sequencing. m6AConquer leverages this categorization to develop a model-based integration framework that enables the faithful detection of 146,250 high-confidence m6A sites reproducible across orthogonal techniques. Additionally, m6AConquer standardizes site calling and m6A probability normalization across platforms using a statistical method that accounts for over-dispersion in m6A level. The current version of m6AConquer archived 1,928 sequencing samples, 72 cell lines or tissues, and 11 effectively integrated orthogonal technique pairs.
Query significant m6A sites by gene names
Query m6A modification levels by multiple genes
Visualize model-based integration and browse reproducible m6A sites
Download quantitative data sharing frameworks
Download site-calling model quality report
Download high-confidence sites supported between orthogonal techniques
Browse reproducible sites across m6A detection techniques
User guides on the usage of single-omics & multi-omics data frameworks
Details of data processing, assembly, site calling, normalization, and integration methods
Introduction to m6AConquer website