m5C-Atlas: a comprehensive database for decoding and annotating the 5-methylcytosine (m5C) epitranscriptome
m5C site
m5C sites processed by Nat Struct Mol Biol pipeline ZIP
References: Huang T, Chen W, Liu J, Gu N, Zhang R. Genome-wide identification of mRNA 5-methylcytosine in mammals. Nat Struct Mol Biol. 2019 May;26(5):380-388.


m5C sites processed by meRanTK
Species names Genome version Type Download
Homo sapienshg19Basic sites InformationCSV
Mus musculusmm10Basic sites InformationCSV
Danio reriodanRer7Basic sites InformationCSV
Drosophila melanogasterdm6Basic sites InformationCSV
Arabidopsis thalianaTAIR10Basic sites InformationCSV
Saccharomyces cerevisiaesacCer3Basic sites InformationCSV
Brassica rapaBrapBasic sites InformationCSV
Caenorhabditis elegansce10Basic sites InformationCSV
Ginkgo bilobaTAIR10Basic sites InformationCSV
Murine leukemia virusMLVBasic sites InformationCSV
Triticum turgidum subspTAIR10Basic sites InformationCSV
Nannochloropsis oculataCCMP525Basic sites InformationCSV
Human immunodeficiency virusHIVBasic sites InformationCSV
Annotation
Species names Type Download
Arabidopsis thalianaRBP Information CSV
Arabidopsis thalianaSNP InformationCSV
Danio rerioSplicing Site InformationCSV
Danio rerioSNP InformationCSV
Drosophila melanogasterSplicing Site InformationCSV
Drosophila melanogasterSNP InformationCSV
Drosophila melanogasterRBP InformationCSV
Drosophila melanogastermiRNA InformationCSV
Homo sapiensSplicing Site InformationCSV
Homo sapiensSNP InformationCSV
Homo sapiensRBP InformationCSV
Homo sapiensmiRNA InformationCSV
Mus musculusSplicing Site InformationCSV
Mus musculusSNP InformationCSV
Mus musculusRBP InformationCSV
Mus musculusmiRNA InformationCSV
Saccharomyces cerevisiaeRBP InformationCSV
Condition
Species names Type Download
Homo sapiensCondition InformationCSV
Mus musculusCondition InformationCSV
Danio rerioCondition InformationCSV
Drosophila melanogasterCondition InformationCSV
Arabidopsis thalianaCondition InformationCSV
Saccharomyces cerevisiaeCondition sites InformationCSV
Brassica rapaCondition InformationCSV
Caenorhabditis elegansCondition InformationCSV
Ginkgo bilobaCondition InformationCSV
Murine leukemia virusCondition InformationCSV
Triticum turgidum subspCondition InformationCSV
Nannochloropsis oculataCondition InformationCSV
Human immunodeficiency virusCondition InformationCSV
Conservation
Species names Type Download
Homo sapiensConservation InformationCSV
Mus musculusConservation InformationCSV
Danio rerioConservation InformationCSV
Technique
Species names Type Download
Homo sapiensAzaIPCSV
Homo sapiensmeRIPCSV
Homo sapiensmiCLIPCSV
Homo sapiensRBS-seqCSV