m⁵C site

m5C sites processed by Nat Struct Mol Biol pipeline	ZIP

References: Huang T, Chen W, Liu J, Gu N, Zhang R. Genome-wide identification of mRNA 5-methylcytosine in mammals. Nat Struct Mol Biol. 2019 May;26(5):380-388.

m⁵C sites processed by meRanTK

Species names	Genome version	Type	Download
Homo sapiens	hg19	Basic sites Information	CSV
Mus musculus	mm10	Basic sites Information	CSV
Danio rerio	danRer7	Basic sites Information	CSV
Drosophila melanogaster	dm6	Basic sites Information	CSV
Arabidopsis thaliana	TAIR10	Basic sites Information	CSV
Saccharomyces cerevisiae	sacCer3	Basic sites Information	CSV
Brassica rapa	Brap	Basic sites Information	CSV
Caenorhabditis elegans	ce10	Basic sites Information	CSV
Ginkgo biloba	TAIR10	Basic sites Information	CSV
Murine leukemia virus	MLV	Basic sites Information	CSV
Triticum turgidum subsp	TAIR10	Basic sites Information	CSV
Nannochloropsis oculata	CCMP525	Basic sites Information	CSV
Human immunodeficiency virus	HIV	Basic sites Information	CSV

Annotation

Species names	Type	Download
Arabidopsis thaliana	RBP Information	CSV
Arabidopsis thaliana	SNP Information	CSV
Danio rerio	Splicing Site Information	CSV
Danio rerio	SNP Information	CSV
Drosophila melanogaster	Splicing Site Information	CSV
Drosophila melanogaster	SNP Information	CSV
Drosophila melanogaster	RBP Information	CSV
Drosophila melanogaster	miRNA Information	CSV
Homo sapiens	Splicing Site Information	CSV
Homo sapiens	SNP Information	CSV
Homo sapiens	RBP Information	CSV
Homo sapiens	miRNA Information	CSV
Mus musculus	Splicing Site Information	CSV
Mus musculus	SNP Information	CSV
Mus musculus	RBP Information	CSV
Mus musculus	miRNA Information	CSV
Saccharomyces cerevisiae	RBP Information	CSV

Condition

Species names	Type	Download
Homo sapiens	Condition Information	CSV
Mus musculus	Condition Information	CSV
Danio rerio	Condition Information	CSV
Drosophila melanogaster	Condition Information	CSV
Arabidopsis thaliana	Condition Information	CSV
Saccharomyces cerevisiae	Condition sites Information	CSV
Brassica rapa	Condition Information	CSV
Caenorhabditis elegans	Condition Information	CSV
Ginkgo biloba	Condition Information	CSV
Murine leukemia virus	Condition Information	CSV
Triticum turgidum subsp	Condition Information	CSV
Nannochloropsis oculata	Condition Information	CSV
Human immunodeficiency virus	Condition Information	CSV

Conservation

Species names	Type	Download
Homo sapiens	Conservation Information	CSV
Mus musculus	Conservation Information	CSV
Danio rerio	Conservation Information	CSV

Technique

Species names	Type	Download
Homo sapiens	AzaIP	CSV
Homo sapiens	meRIP	CSV
Homo sapiens	miCLIP	CSV
Homo sapiens	RBS-seq	CSV